BEGIN:VCALENDAR VERSION:2.0 PRODID:icalendar-ruby CALSCALE:GREGORIAN BEGIN:VEVENT DTSTAMP:20261007T072116Z UID:3ddcab5c-0162-4fe5-9a4c-7338517b8360 DTSTART:20250922T070000Z DTEND:20250926T150000Z DESCRIPTION:This workshop aims to introduce the best practice bioinformatic s methods for processing\, analyses\, visualisation and integration of epi genomics and functional genomics data.\n\n## [Apply here!](https://forms.g le/gToSCQffqBgBBcpr8)\n\n#### Topics covered include:\n• Data processing and analyses for differential DNA methylation with Illumina EPIC arrays a nd Bisulfite-seq\;\n• ChIP-seq: peak calling\, peak independent / depend ent quality metrics\, differential binding analysis\; DNA motif enrichment \;\n• ATAC-seq: peak calling\, peak independent / dependent quality metr ics\, differential accessibility analysis\;\n• Quantitative ChIP-seq usi ng spike-ins\;\n• CUT&\;Tag / CUT&\;RUN: Novel methods to investig ate protein-chromatin interactions\;\n• Functional analysis\, including finding nearest genes and custom features\, GO terms and Reactome pathways enrichment\;\n• Basic multi-omics exploration and integration\;\n• Vi sualisations of epigenomics datasets\;\n• Introduction to analysis of si ngle cell functional genomics data (scATAC-seq)\;\n• Introduction to nf- core pipelines for processing and analysis of epi- and functional genomics data : Methylseq\, ChIP-seq\, ATAC-seq.\n\n#### Important dates and infor mation\nApplication opens: 2025-04-28\nApplication closes: 2025-08-25\nCon firmation to accepted students: 2025-08-29\n\n#### Course fee\nThis online training event is subsidized by academic grants and thereby free of charg e for academic participants. The fee for non-academic participants is 12 0 00 SEK. \nNo-show fee: If you accept a position at the workshop but fail to attend without a valid reason (sickness or urgent family matter)\, you will be liable for a now-show fee of 2 000 SEK (for academic participants) or the full fee (for non-academic participants). \n\n*Please note that NB IS cannot invoice individuals\n\nDue to limited space the course can accom modate a maximum of 25 participants. If we receive more applications\, par ticipants will be selected based on selection criteria\, including (but no t limited to) correct entry requirements\, motivation to attend the course \, as well as gender and geographical balance. SUMMARY:Epigenomics Data Analysis: from Bulk to Single Cell – ONLINE URL;VALUE=URI:https://uppsala.instructure.com/courses/112730 END:VEVENT END:VCALENDAR