The Genomic Footprint of Natural Selection: Inference from Population Data
Description
Transmitting Science is offering the live online course "The Genomic Footprint of Natural Selection: Inference from Population Data".
Natural selection acts on heritable variation that influences survival and reproductive success within specific environmental contexts. With the explosion of genomic data from both living organisms and archaeological remains, investigating the molecular basis of natural selection has become an exceptionally dynamic area of research.
This course examines the concepts and analytical methods used to detect genomic signatures of natural selection, with a particular focus on adaptive (positive or Darwinian) selection in humans.
Through a combination of interactive lectures and hands-on sessions, participants will develop a solid theoretical background in population genetics and measures of genetic diversity relevant to studying selection at the genomic level. The course covers established and emerging bioinformatic approaches for identifying genomic footprints of natural selection, including analyses of modern genotype data in isolated populations, detection of adaptive introgression from other species (such as archaic humans into modern humans), inference of recent selection driven by admixture (for instance, in Latin American populations), and analyses of time-series from ancient DNA data to explore how shifts in genetic variant frequencies through time reveal natural selection in action.
Throughout the course, practical and conceptual challenges, such as demographic confounding, limited statistical power, and difficulties in biological interpretation, will be addressed. By the end of the course, participants will be able to critically assess genomic evidence for natural selection and to understand how such inferences inform research on human evolution and biomedicine.
Learning Outcomes
Natural selection in a population-genetic framework: models, assumptions, and key measures of genetic diversity.
Genomic footprints of different modes of natural selection: statistical frameworks for detection, sources of bias, and technical limitations.
Ancient DNA and selection inference: time-resolved analytical methods and emerging perspectives.
Admixture-enabled selection and adaptive introgression: evolutionary consequences of gene flow within and between species.
From genotype to phenotype: functional follow-up of candidate adaptive variants using public databases and annotation resources.
Natural selection and human genetic diversity: implications for evolutionary inference and biomedical research.
Prerequisites & Technical Requirements
Prerequisites
Graduate or postgraduate degree in a Life Sciences discipline or Anthropology.
Basic knowledge and experience in linux command line, bash scripting, and R.
Technical requirements
Installing R packages and software executables prior to the course will be required.
Participants will be given access to a repository with all data required for the course.
Instructions will be circulated ahead of the course.
Topics & Tags
Affiliations & Networks
Activity log